EnTrf@base [ Enset Transcription Factor Data Base ]

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TF (Transcription Factor) Search by Family
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Ensete ventricosum cv. Input TF Family e.g. bHLH

Transcription Factor distribution on Enset Genome
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Methods of the Enset transcription factor (TF) search: Sequenced Enset genomes were BLAST searched against the Plant Transcription Factor Database version 3.0 using an E-value cut off of 10−10. Putative Enset TF were picked from the blast query applying 50% query coverage and 74% homology with the plant TF.
Sources of the genome sequences: The whole genome sequences of Ensete ventricosum cv. "Bedadit" (Genbank Assembly: GCA_000818735.2), Ensete ventricosum cv. "Derea"(Genbank Assembly: GCA_001884805.1), Ensete ventricosum cv. "Jungle Seeds"(Genbank Assembly: GCA_000331365.2) and Ensete ventricosum cv. "Onjamo" (Genbank Assembly: GCA_001884845.1) were retrieved from the NCBI
Reference: Yemataw, Z., Muzemil, S., Ambachew, D., Tripathi, L., Tesfaye, K., Chala, A., Farbos, A., O’Neill, P., Moore, K., Grant, M. and Studholme, D.J., 2018. Genome sequence data from 17 accessions of Ensete ventricosum, a staple food crop for millions in Ethiopia. Data in brief, 18, pp.285-293.